¿Has probado ya con los comandos del propio SQL Server?
DBCC CHECKALLOC - Check consistency of disk allocation.
DBCC CHECKCATALOG - Check catalog consistency
DBCC CHECKCONSTRAINTS - Check integrity of table constraints.
DBCC CHECKDB - Check allocation, and integrity of all objects.
DBCC CHECKFILEGROUP - Check all tables and indexed views in a filegroup.
DBCC CHECKIDENT - Check identity value for a table.
DBCC CHECKTABLE - Check integrity of a table or indexed view.
DBCC CLEANTABLE - Reclaim space from dropped variable-length columns.